Main Page
From Ircwiki
If you do not have access to this wiki, please email Manish Saggar at mishu{at}cs{dot}utexas{dot}edu, with "Wiki Login" in the subject line and a password of your choice (6-8 alpha numeric characters with punctuation)
Contents |
Imaging Research Center
Admin and IRC Issues
Setting up the HP 2840 printer at the IRC
Connecting to the IRC through VPN
How to access data from outside the IRC
Convert NTFS Hard Drive to FAT32
Linux Issues
Software
Misc
Stimulus Presentation
MRI Analysis
Transferring files from /pi/ to /proj/ directories
Using TACC for RECONSTRUCTING images
Troubleshoot
Groups
Emily's Group
Preston Group
Beer Group
PTSD
DTI
Schnyer Group
Recon
Reconstruct GRAPPA functional Images and Structural images to be used in FSL
Recon for functional runs longer than 6 minutes
FreeSurfer
Overlay functional data on FreeSurfer Average Surface
Time Series
Extract labels for Time Series Analysis
ROI Analysis using Nifti Files -Mar 2008
Generate Masks for Time Series Analysis
TACC
How to Submit jobs to the SuperComputer at TACC
Misc
Folder naming conventions for a project
Acquire a screen shot using gimp
Kiran Group
VISION Group
Info for Huk / Ress / Cormack labs.
General
Setup and Basics
MRI Data Analysis
Functional MRI Data Management -- From Scanner to Server to mrLoadRet
Functional MRI analysis using mrLoadRet
Anatomical Segmentation using MrGray
Anatomical Segmentation using SurfRelax
Resampling project and flat map data
Stimulus Presentation
Using a laptop for stimulus presentation
Behavioral data collection using MR-compatible 4-button box
MATLAB misc
Creating PostScript figures in Matlab
